BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F12SP1|AL426254
(756 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1196 269 5e-72
3x_Contig1666 263 3e-70
>3x_Contig1196
Length = 5660
Score = 269 bits (134), Expect = 5e-72
Identities = 193/214 (90%)
Strand = Plus / Minus
Query: 543 atttatgtttttttggaacatctctacctttsacgtaattccagttaacacagtcatgac 602
|||||| ||||||| |||||| |||||||| || |||||||| |||| ||| |||| ||
Sbjct: 5592 atttatttttttttttaacatcactacctttaacttaattccatttaatacattcattac 5533
Query: 603 atgcgtccggtgttttgcctttcgctacmgtatcgtmatccgtcaatataccatctatca 662
|| | ||| | |||||| ||| ||||| ||||||| ||||||||||||||||||||| |
Sbjct: 5532 attcttccttttttttgcatttagctacagtatcgtaatccgtcaatataccatctataa 5473
Query: 663 ctgtgtgtattctgtgattsagcatgtttacatgccaacctttgtcggttacaacgtcgt 722
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5472 ctgtgtgtattctgtgattaagcatgtttacatgccaacctttgtcggttacaacgtcgt 5413
Query: 723 aaacacaaacttttcctgaatggcaactagtttc 756
||||||||||||||||||||||||||||||||||
Sbjct: 5412 aaacacaaacttttcctgaatggcaactagtttc 5379
>3x_Contig1666
Length = 16162
Score = 263 bits (131), Expect = 3e-70
Identities = 191/211 (90%), Gaps = 1/211 (0%)
Strand = Plus / Minus
Query: 6 atattaccagcccaagtg-tcttttatactggagcatgcacacttaggattgactgctaa 64
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atattaccagcccaagtgctcttttatactggagcatgcacacttaggattgactgctat 242
Query: 65 tgtaaattgtccttttgagaagttcaagtttttgtccgaccatttggtgttttcaggtgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtaaattgtccttttgagaagttcaagtttttgtccgaccatttggtgttttcaggtgt 182
Query: 125 acatcttgcattgatgtgtttgctgttactagatgavagccactccctcagcmaagatat 184
|||||||||||| |||| ||| || |||||| || | | ||||||||||| | || ||||
Sbjct: 181 acatcttgcatttatgttttttcttttactatattaaatccactccctcatcaaatatat 122
Query: 185 cgatgcagttgcgattcttaccgatgtcaaa 215
| || || || | ||||||||| || |||||
Sbjct: 121 ctattcattttctattcttacctatttcaaa 91
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4166
Number of Sequences: 1807
Number of extensions: 4166
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 2
length of query: 756
length of database: 10,358,551
effective HSP length: 16
effective length of query: 740
effective length of database: 10,329,639
effective search space: 7643932860
effective search space used: 7643932860
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)